Deep learning based low-activity PET reconstruction of [11C]PiB and [18F]FE-PE2I in neurodegenerative disorders

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Deep learning based low-activity PET reconstruction of [11C]PiB and [18F]FE-PE2I in neurodegenerative disorders. / Daveau, Raphaël Sura; Law, Ian; Henriksen, Otto Mølby; Hasselbalch, Steen Gregers; Andersen, Ulrik Bjørn; Anderberg, Lasse; Højgaard, Liselotte; Andersen, Flemming Littrup; Ladefoged, Claes Nøhr.

In: NeuroImage, Vol. 259, 119412, 2022.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Daveau, RS, Law, I, Henriksen, OM, Hasselbalch, SG, Andersen, UB, Anderberg, L, Højgaard, L, Andersen, FL & Ladefoged, CN 2022, 'Deep learning based low-activity PET reconstruction of [11C]PiB and [18F]FE-PE2I in neurodegenerative disorders', NeuroImage, vol. 259, 119412. https://doi.org/10.1016/j.neuroimage.2022.119412

APA

Daveau, R. S., Law, I., Henriksen, O. M., Hasselbalch, S. G., Andersen, U. B., Anderberg, L., Højgaard, L., Andersen, F. L., & Ladefoged, C. N. (2022). Deep learning based low-activity PET reconstruction of [11C]PiB and [18F]FE-PE2I in neurodegenerative disorders. NeuroImage, 259, [119412]. https://doi.org/10.1016/j.neuroimage.2022.119412

Vancouver

Daveau RS, Law I, Henriksen OM, Hasselbalch SG, Andersen UB, Anderberg L et al. Deep learning based low-activity PET reconstruction of [11C]PiB and [18F]FE-PE2I in neurodegenerative disorders. NeuroImage. 2022;259. 119412. https://doi.org/10.1016/j.neuroimage.2022.119412

Author

Daveau, Raphaël Sura ; Law, Ian ; Henriksen, Otto Mølby ; Hasselbalch, Steen Gregers ; Andersen, Ulrik Bjørn ; Anderberg, Lasse ; Højgaard, Liselotte ; Andersen, Flemming Littrup ; Ladefoged, Claes Nøhr. / Deep learning based low-activity PET reconstruction of [11C]PiB and [18F]FE-PE2I in neurodegenerative disorders. In: NeuroImage. 2022 ; Vol. 259.

Bibtex

@article{3d82407b1c444197ad5da65e86a86059,
title = "Deep learning based low-activity PET reconstruction of [11C]PiB and [18F]FE-PE2I in neurodegenerative disorders",
abstract = "Purpose: Positron Emission Tomography (PET) can support a diagnosis of neurodegenerative disorder by identifying disease-specific pathologies. Our aim was to investigate the feasibility of using activity reduction in clinical [18F]FE-PE2I and [11C]PiB PET/CT scans, simulating low injected activity or scanning time reduction, in combination with AI-assisted denoising. Methods: A total of 162 patients with clinically uncertain Alzheimer's disease underwent amyloid [11C]PiB PET/CT and 509 patients referred for clinically uncertain Parkinson's disease underwent dopamine transporter (DAT) [18F]FE-PE2I PET/CT. Simulated low-activity data were obtained by random sampling of 5% of the events from the list-mode file and a 5% time window extraction in the middle of the scan. A three-dimensional convolutional neural network (CNN) was trained to denoise the resulting PET images for each disease cohort. Results: Noise reduction of low-activity PET images was successful for both cohorts using 5% of the original activity with improvement in visual quality and all similarity metrics with respect to the ground-truth images. Clinically relevant metrics extracted from the low-activity images deviated < 2% compared to ground-truth values, which were not significantly changed when extracting the metrics from the denoised images. Conclusion: The presented models were based on the same network architecture and proved to be a robust tool for denoising brain PET images with two widely different tracer distributions (delocalized, ([11C]PiB, and highly localized, [18F]FE-PE2I). This broad and robust application makes the presented network a good choice for improving the quality of brain images to the level of the standard-activity images without degrading clinical metric extraction. This will allow for reduced dose or scan time in PET/CT to be implemented clinically.",
keywords = "Alzheimer's disease, Deep learning, Parkinson's disease, PET denoising, [C]PiB, [F]FE-PE2I",
author = "Daveau, {Rapha{\"e}l Sura} and Ian Law and Henriksen, {Otto M{\o}lby} and Hasselbalch, {Steen Gregers} and Andersen, {Ulrik Bj{\o}rn} and Lasse Anderberg and Liselotte H{\o}jgaard and Andersen, {Flemming Littrup} and Ladefoged, {Claes N{\o}hr}",
note = "Publisher Copyright: {\textcopyright} 2022 The Authors",
year = "2022",
doi = "10.1016/j.neuroimage.2022.119412",
language = "English",
volume = "259",
journal = "NeuroImage",
issn = "1053-8119",
publisher = "Elsevier",

}

RIS

TY - JOUR

T1 - Deep learning based low-activity PET reconstruction of [11C]PiB and [18F]FE-PE2I in neurodegenerative disorders

AU - Daveau, Raphaël Sura

AU - Law, Ian

AU - Henriksen, Otto Mølby

AU - Hasselbalch, Steen Gregers

AU - Andersen, Ulrik Bjørn

AU - Anderberg, Lasse

AU - Højgaard, Liselotte

AU - Andersen, Flemming Littrup

AU - Ladefoged, Claes Nøhr

N1 - Publisher Copyright: © 2022 The Authors

PY - 2022

Y1 - 2022

N2 - Purpose: Positron Emission Tomography (PET) can support a diagnosis of neurodegenerative disorder by identifying disease-specific pathologies. Our aim was to investigate the feasibility of using activity reduction in clinical [18F]FE-PE2I and [11C]PiB PET/CT scans, simulating low injected activity or scanning time reduction, in combination with AI-assisted denoising. Methods: A total of 162 patients with clinically uncertain Alzheimer's disease underwent amyloid [11C]PiB PET/CT and 509 patients referred for clinically uncertain Parkinson's disease underwent dopamine transporter (DAT) [18F]FE-PE2I PET/CT. Simulated low-activity data were obtained by random sampling of 5% of the events from the list-mode file and a 5% time window extraction in the middle of the scan. A three-dimensional convolutional neural network (CNN) was trained to denoise the resulting PET images for each disease cohort. Results: Noise reduction of low-activity PET images was successful for both cohorts using 5% of the original activity with improvement in visual quality and all similarity metrics with respect to the ground-truth images. Clinically relevant metrics extracted from the low-activity images deviated < 2% compared to ground-truth values, which were not significantly changed when extracting the metrics from the denoised images. Conclusion: The presented models were based on the same network architecture and proved to be a robust tool for denoising brain PET images with two widely different tracer distributions (delocalized, ([11C]PiB, and highly localized, [18F]FE-PE2I). This broad and robust application makes the presented network a good choice for improving the quality of brain images to the level of the standard-activity images without degrading clinical metric extraction. This will allow for reduced dose or scan time in PET/CT to be implemented clinically.

AB - Purpose: Positron Emission Tomography (PET) can support a diagnosis of neurodegenerative disorder by identifying disease-specific pathologies. Our aim was to investigate the feasibility of using activity reduction in clinical [18F]FE-PE2I and [11C]PiB PET/CT scans, simulating low injected activity or scanning time reduction, in combination with AI-assisted denoising. Methods: A total of 162 patients with clinically uncertain Alzheimer's disease underwent amyloid [11C]PiB PET/CT and 509 patients referred for clinically uncertain Parkinson's disease underwent dopamine transporter (DAT) [18F]FE-PE2I PET/CT. Simulated low-activity data were obtained by random sampling of 5% of the events from the list-mode file and a 5% time window extraction in the middle of the scan. A three-dimensional convolutional neural network (CNN) was trained to denoise the resulting PET images for each disease cohort. Results: Noise reduction of low-activity PET images was successful for both cohorts using 5% of the original activity with improvement in visual quality and all similarity metrics with respect to the ground-truth images. Clinically relevant metrics extracted from the low-activity images deviated < 2% compared to ground-truth values, which were not significantly changed when extracting the metrics from the denoised images. Conclusion: The presented models were based on the same network architecture and proved to be a robust tool for denoising brain PET images with two widely different tracer distributions (delocalized, ([11C]PiB, and highly localized, [18F]FE-PE2I). This broad and robust application makes the presented network a good choice for improving the quality of brain images to the level of the standard-activity images without degrading clinical metric extraction. This will allow for reduced dose or scan time in PET/CT to be implemented clinically.

KW - Alzheimer's disease

KW - Deep learning

KW - Parkinson's disease

KW - PET denoising

KW - [C]PiB

KW - [F]FE-PE2I

U2 - 10.1016/j.neuroimage.2022.119412

DO - 10.1016/j.neuroimage.2022.119412

M3 - Journal article

C2 - 35753592

AN - SCOPUS:85133215660

VL - 259

JO - NeuroImage

JF - NeuroImage

SN - 1053-8119

M1 - 119412

ER -

ID: 321644299